Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGGTGAAGACCCAGGGAACCCAGGAGGGCCCTTCTGGGGCAGTGG
(((((.(((((((((((((...&.)))))))))))........)).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_080607
GeneSymbolVSTM2L
Binding site1322,1368
Score0.846
Seed0
Au0.338
Energy-27.2
Binding len29
Me-5.839
Phylopstem-0.1582441428571429
Phylopflank-0.07195278249999992
Longest consecutive pairings11
Position of longest consecutive pairings17
Pairings in 3prime end5
Position3UTR
2D Structure