Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATGTGCAAGTATGCCAGTGTG
(((((((((((..((((.((..&)).)))).))))))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_080618
GeneSymbolCTCFL
Binding site1325,1346
Score0.923
Seed1
Au0.544
Energy-19.4
Binding len21
Me-8.574
Phylopstem-0.26358299999999996
Phylopflank-0.32523777
Longest consecutive pairings9
Position of longest consecutive pairings4
Pairings in 3prime end5
PositionCDS
2D Structure