Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TGCCCGGGAGGGCTGCCT
....(((.((((((((((((..&))))))))))))..))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_080626
GeneSymbolBRI3BP
Binding site5427,5445
Score0.846
Seed0
Au0.485
Energy-25.0
Binding len18
Me-11.86
Phylopstem-0.23329447499999997
Phylopflank-0.47782998
Longest consecutive pairings12
Position of longest consecutive pairings6
Pairings in 3prime end6
Position3UTR
2D Structure