Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATCACCAACTGTGTGCGCCAGGC
.((((((.((((..((......&.))..)))).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_080627
GeneSymbolSOGA1
Binding site4233,4258
Score1.0
Seed1
Au0.426
Energy-18.1
Binding len17
Me-8.253
Phylopstem-0.027816266666666683
Phylopflank-0.023608536249999985
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure