Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGGGGAAGCAGGTGCAGAAGGTCC
.(((((((((.(((((((.((&))))))))..).)))))..)))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_080629
GeneSymbolCOL11A1
Binding site4519,4543
Score0.923
Seed1
Au0.426
Energy-25.1
Binding len24
Me-6.618
Phylopstem5.251488723636363
Phylopflank3.51423336275
Longest consecutive pairings8
Position of longest consecutive pairings16
Pairings in 3prime end7
PositionCDS
2D Structure