Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGGGGAAGCAGGTGCAGAAGGTCC
.(((((((((.(((((((.((&))))))))..).)))))..)))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_080630
GeneSymbolCOL11A1
Binding site4135,4159
Score0.846
Seed1
Au0.426
Energy-25.1
Binding len24
Me-6.618
Phylopstem5.106871636363636
Phylopflank5.504395186249997
Longest consecutive pairings8
Position of longest consecutive pairings16
Pairings in 3prime end7
PositionCDS
2D Structure