Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTAATGATACGAGTTTGTATCCTCATATGTATGCCAGA
..(((((((((((((..(((..&.)))..))).)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_080632
GeneSymbolUPF3B
Binding site284,323
Score1.0
Seed1
Au0.647
Energy-21.1
Binding len21
Me-5.19
Phylopstem0.4879670714285715
Phylopflank0.26918294000000004
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure