Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATCTATAGTAGTGCCAGGA
.((((((((....(((((((((&)))))))))...)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_080645
GeneSymbolCOL12A1
Binding site2751,2772
Score0.846
Seed1
Au0.456
Energy-22.6
Binding len21
Me-12.497
Phylopstem2.7738704888888885
Phylopflank4.31810758125
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end8
PositionCDS
2D Structure