Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ACATTGTGTTGCTGGTGGATGGATCATGGAGCATCGGCCGGGC
.(((((((((((((((......&)))))))))...........................)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_080645
GeneSymbolCOL12A1
Binding site415,458
Score0.846
Seed1
Au0.515
Energy-17.2
Binding len43
Me-3.793
Phylopstem0.48301884523809513
Phylopflank1.5154514312500003
Longest consecutive pairings9
Position of longest consecutive pairings34
Pairings in 3prime end2
PositionCDS
2D Structure