Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCCAGCACTTTGGGAGGCCGAGGCCGGTGA
((((((((((((((((((....&))))).......)))))....)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_080652
GeneSymbolTMEM41A
Binding site1139,1169
Score0.846
Seed1
Au0.412
Energy-23.0
Binding len30
Me-3.938
Phylopstem-0.05477496879310345
Phylopflank0.324683003375
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure