Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCCGGAGGAGGAGCCC
....((((((((((((((....&))))))).))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_080655
GeneSymbolMSANTD3
Binding site658,674
Score1.0
Seed0
Au0.338
Energy-24.5
Binding len16
Me-9.547
Phylopstem2.9976564266666665
Phylopflank2.8039088375
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end4
PositionCDS
2D Structure