Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCATGAAAGGAGAGAGAAAGTGA
((((..(((((((((((((...&))))).))))))))......)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_080655
GeneSymbolMSANTD3
Binding site539,564
Score1.0
Seed0
Au0.515
Energy-23.6
Binding len25
Me-9.958
Phylopstem3.9652870714285706
Phylopflank3.41121678375
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end5
PositionCDS
2D Structure