Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCGCAGTGGAGGAGCTGGTT
.((((((((((((((((((((.&))))).))).)))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_080656
GeneSymbolCDKN2AIPNL
Binding site46,69
Score1.0
Seed1
Au0.25
Energy-28.6
Binding len23
Me-3.793
Phylopstem0.19632860454545445
Phylopflank0.291382458888889
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure