Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCGCACCCCTGGCCATTGTACCTTTTGATGTTTAGAAGTTCGTGGAAGTAGACGCTGAGGTGTGCAGAGGAGCTGGTGG
(((((((((((((((.(((...&.))).)))......)))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_080668
GeneSymbolCDCA5
Binding site1994,2076
Score1.0
Seed1
Au0.456
Energy-23.8
Binding len27
Me-4.171
Phylopstem1.8833064285714283
Phylopflank0.50044033825
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure