Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCACAGACTGGGGAGGAGAATCAGTGG
(((((((((((((((((.....&.)))))))))))..)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_080668
GeneSymbolCDCA5
Binding site1102,1130
Score0.846
Seed1
Au0.441
Energy-22.6
Binding len21
Me-3.938
Phylopstem-0.36157254736842104
Phylopflank-0.29282601374999995
Longest consecutive pairings11
Position of longest consecutive pairings9
Pairings in 3prime end3
Position3UTR
2D Structure