Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCAGGAAGGAGCCTGAGGCACAGCACCAAGGCATGGGGTAGGGTGG
(((((((((((((((((.....&)))))))))))))............................)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_080669
GeneSymbolSLC46A1
Binding site4048,4094
Score0.846
Seed1
Au0.324
Energy-26.2
Binding len46
Me-3.938
Phylopstem0.16142549111111112
Phylopflank0.3524443399999999
Longest consecutive pairings13
Position of longest consecutive pairings33
Pairings in 3prime end3
Position3UTR
2D Structure