Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&TGGGAAGGAGGGAGGGA
...((((.(..((((((((..&))))))))..).)))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_080669
GeneSymbolSLC46A1
Binding site1947,1964
Score0.846
Seed0
Au0.397
Energy-25.2
Binding len17
Me-12.895
Phylopstem-0.20862623750000003
Phylopflank-0.28327667999999995
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end6
Position3UTR
2D Structure