Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTATGCAGCAGGGGGCCT
....((((((((.(((.((((.&)))).))).)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_080670
GeneSymbolSLC35A4
Binding site1199,1217
Score0.846
Seed0
Au0.353
Energy-23.7
Binding len18
Me-10.836
Phylopstem0.631215375
Phylopflank2.1598254387499995
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure