Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCGTGGAAGAGCTGGA
..((((((.(((((..(((((.&)))))..))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_080672
GeneSymbolPHACTR3
Binding site1820,1839
Score0.885
Seed1
Au0.529
Energy-20.6
Binding len19
Me-6.982
Phylopstem6.425497166666667
Phylopflank4.739163659999999
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure