Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCAGAGGAAACTGGCTGGAGCCTGGACCAGCTGGGGTTGATGCTTTTGCAGTGG
(((((((((((((((((((((.&))))))))))).........))))))...........................)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_080678
GeneSymbolUBE2F
Binding site1559,1617
Score0.923
Seed1
Au0.485
Energy-27.3
Binding len58
Me-3.938
Phylopstem0.9660486403508778
Phylopflank0.74168723625
Longest consecutive pairings11
Position of longest consecutive pairings47
Pairings in 3prime end7
Position3UTR
2D Structure