Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTATCTAGGGAGCCCTGGGCCAGG
..(((((((((((((((((((.&))))))))))))....))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_080680
GeneSymbolCOL11A2
Binding site5530,5554
Score0.846
Seed1
Au0.309
Energy-26.4
Binding len24
Me-4.957
Phylopstem3.070812900000001
Phylopflank2.5458724274999995
Longest consecutive pairings12
Position of longest consecutive pairings12
Pairings in 3prime end7
Position3UTR
2D Structure