Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGAAGCCGGTCAGTGC
((((((((.((((((((((...&))))))))))..)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_080701
GeneSymbolTREX2
Binding site18,39
Score0.923
Seed1
Au0.324
Energy-27.2
Binding len21
Me-4.994
Phylopstem-0.07689716000000003
Phylopflank0.54247846875
Longest consecutive pairings10
Position of longest consecutive pairings11
Pairings in 3prime end5
Position5UTR
2D Structure