Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCGGGTGGTTTGGGGGTGTTGGTGT
(((((((.(((((((((((((.&))))))))).......)))).))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_080704
GeneSymbolTRPV1
Binding site3847,3876
Score1.0
Seed1
Au0.382
Energy-24.3
Binding len29
Me-6.251
Phylopstem-0.19229371
Phylopflank0.0030846562500000153
Longest consecutive pairings9
Position of longest consecutive pairings20
Pairings in 3prime end7
Position3UTR
2D Structure