Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGTGAGACAGAGTTTCACTCTTGTTGCCCAGGCTGGAGTGCAGTGG
((((((((((..(((((((((.&.)))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_080705
GeneSymbolTRPV1
Binding site3358,3406
Score0.846
Seed1
Au0.456
Energy-28.9
Binding len24
Me-10.109
Phylopstem3.0227737909090915
Phylopflank3.1678685887499998
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure