Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCTGAAGGAAGATTGCAACCGGCTGCAGC
(((((((..(((((((((...&.)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047421764
GeneSymbolIKBKB
Binding site1351,1382
Score0.923
Seed1
Au0.412
Energy-22.4
Binding len18
Me-7.308
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure