Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGAGCGACTGGAGAAGTGGCTGCAAC
((((((((((((((((..(((&)))..))))))......)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047421764
GeneSymbolIKBKB
Binding site844,872
Score0.846
Seed1
Au0.397
Energy-21.8
Binding len28
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure