Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTGCCCAGGCTGGAGTGCAGTGG
((((((((((..(((((((((.&)))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_080706
GeneSymbolTRPV1
Binding site3709,3732
Score0.923
Seed1
Au0.456
Energy-28.9
Binding len23
Me-10.109
Phylopstem-0.13358118181818182
Phylopflank0.14012031000000005
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure