Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCGGGTGGTTTGGGGGTGTTGGTGT
(((((((.(((((((((((((.&))))))))).......)))).))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_080706
GeneSymbolTRPV1
Binding site4099,4128
Score0.846
Seed1
Au0.382
Energy-24.3
Binding len29
Me-6.251
Phylopstem-0.14887635999999999
Phylopflank-0.5165663087500001
Longest consecutive pairings9
Position of longest consecutive pairings20
Pairings in 3prime end7
Position3UTR
2D Structure