Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGTCGGCACAGCGGCAAGCTTGCATGTATGCCAGC
..(((((((((.((((((....&.))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_080717
GeneSymbolTBX5
Binding site1162,1198
Score0.923
Seed1
Au0.338
Energy-20.3
Binding len17
Me-8.304
Phylopstem4.683923888888888
Phylopflank1.9801739443749997
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure