Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTAATTAAGTAATAACATGAAATGAAACCCAGCATAGGAGCTGGC
..(((((((((.(((((((...&.)))))).).))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_080717
GeneSymbolTBX5
Binding site2831,2877
Score0.846
Seed1
Au0.662
Energy-24.8
Binding len20
Me-8.304
Phylopstem5.606139222222223
Phylopflank5.2734711875
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure