Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCGTTCAAGGAAGGAGGGGTGG
((((..(((((((((..(((((&))))).....))))))))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_080725
GeneSymbolSRXN1
Binding site989,1014
Score0.923
Seed0
Au0.441
Energy-22.3
Binding len25
Me-10.191
Phylopstem-0.07571633333333333
Phylopflank-0.008827549500000018
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end6
Position3UTR
2D Structure