Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCAAGGAAAGGAAAACCTTGATTGCAGTGG
(((((..((((((((..((((.&))))..))))))))............))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_080725
GeneSymbolSRXN1
Binding site781,813
Score0.846
Seed0
Au0.618
Energy-21.2
Binding len32
Me-7.615
Phylopstem0.35569221250000005
Phylopflank0.00011134425000000614
Longest consecutive pairings8
Position of longest consecutive pairings18
Pairings in 3prime end5
Position3UTR
2D Structure