Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATGCCAGGG
.((((((((.............&)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_080738
GeneSymbolEDARADD
Binding site1369,1378
Score0.923
Seed1
Au0.529
Energy-15.1
Binding len9
Me-14.322
Phylopstem2.881675125
Phylopflank1.6664450650000002
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure