Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGAGGAGCTGGG
..((((((((..(((((((...&))))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_080744
GeneSymbolSSC4D
Binding site1683,1699
Score1.0
Seed1
Au0.338
Energy-25.2
Binding len16
Me-11.129
Phylopstem4.6114986125
Phylopflank2.5665770725000003
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure