Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGGAAGGCAGGAGGGG
...((((.(.((((((((...&)))))))).).)))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_080744
GeneSymbolSSC4D
Binding site2496,2512
Score0.846
Seed0
Au0.368
Energy-27.1
Binding len16
Me-10.071
Phylopstem1.2168977875
Phylopflank0.6539858074999998
Longest consecutive pairings8
Position of longest consecutive pairings8
Pairings in 3prime end5
Position3UTR
2D Structure