Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATGGCCACCACACCAACACCTGGCCTTCTGCATCAGAATGCCAGGC
.((((((((...(((((((...&.)))))))....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_080751
GeneSymbolTMC2
Binding site4720,4768
Score0.846
Seed1
Au0.382
Energy-21.8
Binding len21
Me-11.207
Phylopstem-0.46206525000000004
Phylopflank-0.06513193785
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure