Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCGGAATTGCCGTGGCTGGGATGAAGGGTGAGCCAGG
..(((((((((((((((((...&))))))))....................)).))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_080801
GeneSymbolCOL13A1
Binding site1453,1492
Score0.846
Seed1
Au0.353
Energy-23.9
Binding len39
Me-4.957
Phylopstem2.286276239473684
Phylopflank3.050769015000001
Longest consecutive pairings8
Position of longest consecutive pairings31
Pairings in 3prime end5
PositionCDS
2D Structure