Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCTGGAAGCGGAGCGCGGG
..(((((((((((((((((...&))))))))).))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_080802
GeneSymbolCOL13A1
Binding site738,758
Score0.846
Seed1
Au0.324
Energy-23.8
Binding len20
Me-4.957
Phylopstem2.4988650526315794
Phylopflank3.5188257125
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end5
PositionCDS
2D Structure