Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGGGAGCTCCCCAGGTGCGAGGAGCCTGCCAGCCAGTGG
((((((((((((((((((.((.&.)).))))))...))))))))........)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_080819
GeneSymbolGPR78
Binding site3907,3947
Score0.846
Seed1
Au0.368
Energy-26.6
Binding len34
Me-3.938
Phylopstem-0.6373109482758621
Phylopflank-0.4878840243749999
Longest consecutive pairings8
Position of longest consecutive pairings13
Pairings in 3prime end6
Position3UTR
2D Structure