Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTGCCCAGGTTTGGGAGATAAATGCCGGG
..(((((((((.(((((((((.&)))))))))...)))).......))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_080819
GeneSymbolGPR78
Binding site2149,2178
Score0.846
Seed1
Au0.397
Energy-23.4
Binding len29
Me-8.304
Phylopstem-0.36955998888888886
Phylopflank-0.39310565
Longest consecutive pairings9
Position of longest consecutive pairings20
Pairings in 3prime end7
Position3UTR
2D Structure