Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCGTGTTCTCACAGTGAAGGGCGTGCCCTGTGTGCCGGGG
.(((((((((((..(((.....&.)))..))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_080836
GeneSymbolSTK35
Binding site2734,2775
Score1.0
Seed1
Au0.412
Energy-21.7
Binding len18
Me-5.939
Phylopstem-0.24220679999999997
Phylopflank0.20883480374999988
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure