Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCCGACGCGAGGCAGAGTGGGGCCGTGTGG
((((((((((.(((((......&.))))).))))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_080859
GeneSymbolOR1K1
Binding site793,823
Score0.923
Seed1
Au0.353
Energy-22.3
Binding len19
Me-6.762
Phylopstem-0.29100812727272724
Phylopflank0.11774772375
Longest consecutive pairings7
Position of longest consecutive pairings5
Pairings in 3prime end2
PositionCDS
2D Structure