Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTATGACCAGGA
.((((((((((...........&))))).))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_080860
GeneSymbolRSPH1
Binding site877,889
Score0.846
Seed1
Au0.426
Energy-15.8
Binding len12
Me-10.255
Phylopstem3.433490545454545
Phylopflank3.3552754400000007
Longest consecutive pairings5
Position of longest consecutive pairings7
Pairings in 3prime end0
PositionCDS
2D Structure