Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATGGTGTTTCACTACATTGGCCAGGC
.((((((...((((((((....&.)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_080867
GeneSymbolSOCS4
Binding site5391,5418
Score0.923
Seed1
Au0.5
Energy-20.9
Binding len16
Me-8.406
Phylopstem-0.245291625
Phylopflank0.16744788500000007
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure