Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTAAGGGCCTGAATGCCAGGA
.((((((((.((..........&.)).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_080879
GeneSymbolRAB40A
Binding site1024,1045
Score0.846
Seed1
Au0.426
Energy-15.8
Binding len13
Me-8.15
Phylopstem3.2786966250000003
Phylopflank3.193556979499999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure