Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTAGACAGAAGACAGGAGTCAT
...(((((((((((((..(((.&)))..)))))...)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_080879
GeneSymbolRAB40A
Binding site200,222
Score0.815
Seed0
Au0.588
Energy-20.3
Binding len22
Me-6.515
Phylopstem0.9645819050000002
Phylopflank1.3279886495000004
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure