Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCGGAGGGGGGACTCGCAGCCTTACCAGG
..(((((((((((((((.....&))))))))))).............)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_100264
GeneSymbolWAC
Binding site238,267
Score0.923
Seed1
Au0.412
Energy-20.4
Binding len29
Me-4.957
Phylopstem3.912436392857143
Phylopflank2.98119801625
Longest consecutive pairings11
Position of longest consecutive pairings18
Pairings in 3prime end3
Position5UTR
2D Structure