Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCTTGAGGAAGGAGCCC
....((((((((((((((((((&)))))))..))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_130384
GeneSymbolATRIP
Binding site2714,2735
Score0.987
Seed0
Au0.426
Energy-28.2
Binding len21
Me-9.547
Phylopstem0.9512380500000003
Phylopflank0.5067167449999997
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure