Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGCAGAGGGAGGCAGA
..(((.(((((((((((((...&))))))..))))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_130384
GeneSymbolATRIP
Binding site1304,1324
Score0.846
Seed0
Au0.368
Energy-25.2
Binding len20
Me-6.858
Phylopstem1.1642062
Phylopflank2.1858453662499997
Longest consecutive pairings7
Position of longest consecutive pairings5
Pairings in 3prime end5
PositionCDS
2D Structure