Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTGCATTGTCATTGCTAT
...(((((.(((((((((((..&)))))))))))...))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_130391
GeneSymbolPTPRD
Binding site2771,2791
Score1.0
Seed0
Au0.618
Energy-18.2
Binding len20
Me-7.571
Phylopstem6.5712481818181825
Phylopflank2.1986005200000003
Longest consecutive pairings11
Position of longest consecutive pairings9
Pairings in 3prime end6
PositionCDS
2D Structure